water permeability calculation using NAMD trajectories

From: Pragya Priyadarshini (pragya_at_imtech.res.in)
Date: Tue Dec 13 2016 - 22:39:41 CST

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Hi all,

I need to know how to calculate water permeability(pf) through a channel
protein using trajectory. Does any script is available for the same?

Any suggestion will be highly appreciable.

Thanks and regards

-- 
Pragya Priyadarshini
Junior Research Fellow
C/o Dr. Balvinder Singh
Bioinformatics Center (G N R P C)
Institute of Microbial Technology-CSIR
Sector 39A, Chandigarh-160036, INDIA
 

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