query in the equilibration step

From: d.ronika_at_iitg.ernet.in
Date: Thu Sep 08 2016 - 07:32:32 CDT

I have a protein complex and in the equilibration step, after 2200000 num
steps I am not getting a straight line. If I am not getting a totally
straight line in the equilibration step then this means what??? how much
important is it to get a totally straight line in the equilibration step??

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