From: Downs, Andrew S CTR USARMY ARL (US) (andrew.s.downs3.ctr_at_mail.mil)
Date: Tue Jan 12 2016 - 07:27:59 CST
CLASSIFICATION: UNCLASSIFIED
Thanks for your reply, I should have explained more.
In my example, I have already built charm++ so that module swap has already been done.
PrgEnv-intel is loaded.
A fellow researcher here previously build NAMD 2.10 on our XC40, so he's left it up to me to build 2.11.
I've tried both intel and gnu compilers, both break at various points.
All of our intel compilers break at the point in my original message. Gnu breaks at linkage towards the end.
I'm not very concerned with gnu because the intel compilers produce faster code, which is why I only provided error output for intel.
Thanks for your help.
Andrew Downs
-----Original Message-----
From: Norman Geist [mailto:norman.geist_at_uni-greifswald.de]
Sent: Tuesday, January 12, 2016 3:17 AM
To: namd-l_at_ks.uiuc.edu; Downs, Andrew S CTR USARMY ARL (US) <andrew.s.downs3.ctr_at_mail.mil>
Subject: [Non-DoD Source] AW: namd-l: Compilation error across Intel 14, 15 and 16 (UNCLASSIFIED)
Hey,
I think we need at least the command line with which you are trying to build
charm++.
This generally looks like not doing the right thing to build on cray generally?
Did you follow the instructions given by the maintainer of that cray system?
Something like:
module switch PrgEnv-cray PrgEnv-intel
Norman Geist
> -----Ursprüngliche Nachricht-----
> Von: owner-namd-l_at_ks.uiuc.edu [mailto:owner-namd-l_at_ks.uiuc.edu] Im
> Auftrag von Downs, Andrew S CTR USARMY ARL (US)
> Gesendet: Montag, 11. Januar 2016 20:10
> An: namd-l_at_ks.uiuc.edu
> Betreff: namd-l: Compilation error across Intel 14,15 and 16
(UNCLASSIFIED)
>
> CLASSIFICATION: UNCLASSIFIED
>
> Hello,
>
> I get the same error regardless of which Intel compiler I use between
version
> 14, 15 or 16. I'm compiling on a Cray XC-40.
> What's strange is the errors I'm getting look like the code itself is
wrong, but I
> know how unlikely that is. Please see below:
>
> intel compiler output:
>
> 1:54pm adowns : make
>
> found module rca/1.0.0-2.0502.53711.3.127.ari found module
> PrgEnv-intel/5.2.40 if [ ! -d inc ]; then mkdir -p inc; fi if [ ! -f
> inc/.exists ]; then touch inc/.exists; fi if [ ! -d obj ]; then mkdir
> -p obj; fi if [ ! -f obj/.exists ]; then touch obj/.exists; fi cp
> src/Node.ci inc .rootdir/charm-6.7.0/mpi-crayxc/bin/charmc inc/Node.ci
> rm -f inc/Node.ci mv Node.def.h inc mv Node.decl.h inc cp
> src/PatchMgr.ci inc .rootdir/charm-6.7.0/mpi-crayxc/bin/charmc
> inc/PatchMgr.ci rm -f inc/PatchMgr.ci mv PatchMgr.def.h inc mv
> PatchMgr.decl.h inc cp src/ComputeMoaMgr.ci inc
> .rootdir/charm-6.7.0/mpi-crayxc/bin/charmc inc/ComputeMoaMgr.ci rm -f
> inc/ComputeMoaMgr.ci mv ComputeMoaMgr.def.h inc mv
> ComputeMoaMgr.decl.h inc cp src/ComputeMgr.ci inc
> .rootdir/charm-6.7.0/mpi-crayxc/bin/charmc inc/ComputeMgr.ci rm -f
> inc/ComputeMgr.ci mv ComputeMgr.def.h inc mv ComputeMgr.decl.h inc cp
> src/WorkDistrib.ci inc .rootdir/charm-6.7.0/mpi-crayxc/bin/charmc
> inc/WorkDistrib.ci rm -f inc/WorkDistrib.ci mv WorkDistrib.def.h inc
> mv WorkDistrib.decl.h inc CC -I.rootdir/charm-6.7.0/mpi-crayxc/include
> -DCMK_OPTIMIZE=1 -Isrc -Iinc -Iplugins/include -DSTATIC_PLUGIN -
> I/usr/cta/unsupported/NAMD/tcl8.5.9/include -DNAMD_TCL -
> I.rootdir/fftw/include -DNAMD_FFTW -DNAMD_VERSION=\"2.11\" -
> DNAMD_PLATFORM=\"CRAY-XC-MPI\" -
> DREMOVE_PROXYRESULTMSG_EXTRACOPY -
> DNODEAWARE_PROXY_SPANNINGTREE -DUSE_NODEPATCHMGR -
> DUSE_CKLOOP=1 -O2 -ip -no-vec -o obj/ComputeMoa.o -c src/ComputeMoa.C
> In file included from src/Node.h(16),
> from src/ComputeMoa.C(25):
> .rootdir/charm-6.7.0/mpi-crayxc/include/charm++.h(368): error:
> expected an identifier
> template <typename... Args>
> ^
>
> In file included from src/Node.h(16),
> from src/ComputeMoa.C(25):
> .rootdir/charm-6.7.0/mpi-crayxc/include/charm++.h(369): error:
> expected a ")"
> CBaseT1(Args... args) : Parent(args...) { thisProxy = this; }
> ^
>
> In file included from src/Node.h(16),
> from src/ComputeMoa.C(25):
> .rootdir/charm-6.7.0/mpi-crayxc/include/charm++.h(369): error: not a
> valid member class or function template declaration
> CBaseT1(Args... args) : Parent(args...) { thisProxy = this; }
> ^
>
> In file included from .rootdir/charm-6.7.0/mpi-
> crayxc/include/charm++.h(1037),
> from src/Node.h(16),
> from src/ComputeMoa.C(25):
> .rootdir/charm-6.7.0/mpi-crayxc/include/ckmemcheckpoint.h(144): error:
> no instance of constructor "CBaseT1<Parent, CProxy_Derived>::CBaseT1
> [with Parent=Group, CProxy_Derived=CProxy_CkMemCheckPT]" matches the
> argument list In file included from .rootdir/charm-6.7.0/mpi-
> crayxc/include/charm++.h(1037),
> from src/Node.h(16),
> from src/ComputeMoa.C(25):
> argument types are: (CkMigrateMessage *) In file included
> from .rootdir/charm-6.7.0/mpi- crayxc/include/charm++.h(1037),
> from src/Node.h(16),
> from src/ComputeMoa.C(25):
> CkMemCheckPT(CkMigrateMessage *m):CBase_CkMemCheckPT(m) {};
> ^
>
> In file included from .rootdir/charm-6.7.0/mpi-
> crayxc/include/cklocation.h(31),
> from
.rootdir/charm-6.7.0/mpi-crayxc/include/ckarray.h(29),
> from
.rootdir/charm-6.7.0/mpi-crayxc/include/charm++.h(1039),
> from src/Node.h(16),
> from src/ComputeMoa.C(25):
> .rootdir/charm-6.7.0/mpi-crayxc/include/MetaBalancer.h(56): error: no
> instance of constructor "CBaseT1<Parent, CProxy_Derived>::CBaseT1
> [with Parent=Group, CProxy_Derived=CProxy_MetaBalancer]" matches the
> argument list In file included from .rootdir/charm-6.7.0/mpi-
> crayxc/include/cklocation.h(31),
> from
.rootdir/charm-6.7.0/mpi-crayxc/include/ckarray.h(29),
> from
.rootdir/charm-6.7.0/mpi-crayxc/include/charm++.h(1039),
> from src/Node.h(16),
> from src/ComputeMoa.C(25):
> argument types are: (CkMigrateMessage *) In file included
> from .rootdir/charm-6.7.0/mpi- crayxc/include/cklocation.h(31),
> from
.rootdir/charm-6.7.0/mpi-crayxc/include/ckarray.h(29),
> from
.rootdir/charm-6.7.0/mpi-crayxc/include/charm++.h(1039),
> from src/Node.h(16),
> from src/ComputeMoa.C(25):
> MetaBalancer(CkMigrateMessage *m) : CBase_MetaBalancer(m) { init(); }
> ^
>
> In file included from .rootdir/charm-6.7.0/mpi-
> crayxc/include/cklocation.h(31),
> from
.rootdir/charm-6.7.0/mpi-crayxc/include/ckarray.h(29),
> from
.rootdir/charm-6.7.0/mpi-crayxc/include/charm++.h(1039),
> from src/Node.h(16),
> from src/ComputeMoa.C(25):
> .rootdir/charm-6.7.0/mpi-crayxc/include/MetaBalancer.h(191): error: no
> instance of constructor "CBaseT1<Parent, CProxy_Derived>::CBaseT1
> [with Parent=Group, CProxy_Derived=CProxy_MetaBalancerRedn]" matches
> the argument list In file included from .rootdir/charm-6.7.0/mpi-
> crayxc/include/cklocation.h(31),
> from
.rootdir/charm-6.7.0/mpi-crayxc/include/ckarray.h(29),
> from
.rootdir/charm-6.7.0/mpi-crayxc/include/charm++.h(1039),
> from src/Node.h(16),
> from src/ComputeMoa.C(25):
> argument types are: (CkMigrateMessage *) In file included
> from .rootdir/charm-6.7.0/mpi- crayxc/include/cklocation.h(31),
> from
.rootdir/charm-6.7.0/mpi-crayxc/include/ckarray.h(29),
> from
.rootdir/charm-6.7.0/mpi-crayxc/include/charm++.h(1039),
> from src/Node.h(16),
> from src/ComputeMoa.C(25):
> MetaBalancerRedn(CkMigrateMessage *m) :
> CBase_MetaBalancerRedn(m) {init();}
> ^
>
> compilation aborted for src/ComputeMoa.C (code 2)
> make: *** [obj/ComputeMoa.o] Error 2
>
>
> CLASSIFICATION: UNCLASSIFIED
CLASSIFICATION: UNCLASSIFIED
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