replica exchange module

From: Jessen Lucas (
Date: Mon Oct 26 2015 - 01:29:43 CDT

Dear NAMD users,

I want to use replica exchange module, I read codes in replica.namd and
swarm.namd from tutorial files.

I was confused about how to set up and run each replica configuration. my
diea is

temperature 300 + $replica_id
source $namd_config_file
puts $replica_id

So will source $namd_config_file every MD timestep? I do not what the
workflow is in here.
Is it right? I am new to NAMD, please give me some suggestion of replica
exchange module.

J. Lucas

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