From: Jerome Karp (jerome.karp_at_med.einstein.yu.edu)
Date: Tue Sep 22 2015 - 11:44:37 CDT
Thanks so much - this is exactly what I was looking for.
- Jerry Karp
On Tue, Sep 22, 2015 at 11:46 AM, Chris Chipot <chipot_at_ks.uiuc.edu> wrote:
> Thanks for pointing this out. Something must have happened in the
> preparation of the final tar file containing all the documents necessary
> to perform the tutorial. Attached you will find the missing file. We will
> correct this issue and upload a new distribution.
> Chris Chipot
> On 9/22/15 8:39 AM, Jerome Karp wrote:
> Thanks! I did see the tutorial and looked at the files, but couldn't find
> the main file *swarms.namd* in the folder. (The Archives folder has two
> subfolders, "Path Collective Variables" and "String with Swarms of
> Trajectories," and *initial.conf* [and also *restart.conf*] call
> *../swarms.namd*, but this file isn't included in the directory
> immediately above, or in any of the subdirectories as far as I can find.)
> I assume this file is supposed to be similar to *replica.namd* which is
> in the */lib/replica* folder of the NAMD base directory, but it doesn't
> seem to be included. Is there anywhere I can find it?
> Thanks again for your help.
> - Jerry Karp
> Chris Chipot, Ph.D.
> Theoretical and Computational Biophysics Group
> 3047 Beckman Institute for Advanced Science and Technology
> University of Illinois at Urbana-Champaign
> 405 North Mathews
> Urbana, Illinois 61801 Phone: (217) 244-5493
> E-mail: chipot_at_ks.uiuc.edu
> Web: http://www.ks.uiuc.edu/~chipot
> It is hard for France to maintain a thirty-five-hour workweek when
> China and India have invented a thirty-five-hour workday.
> Thomas L. Friedman
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