Loading and analysis of DCD file (~300 MB)

From: Stephan Grein (grein_at_informatik.uni-frankfurt.de)
Date: Thu Jul 24 2014 - 06:18:45 CDT

Dear all,

i have a simple analysis script, but nevertheless it will exit with a
bad_alloc (cannot allocate region) after analysing the first 1000 of
1100 frames.

I could narrow the problem down - i think it's because i'm generating in
the for loop many representation with atomselect - could this be true?
It's a bit time consuming to create the representations out of the loop.

Find attached the script please.
Any hints would be appreciated.

Best regards,

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