Protein solvation

From: farzad kiani (
Date: Sat May 10 2014 - 12:28:26 CDT


Dear NAMD users
I want to simulate a protein with it target in Plasma to calculate the adsorption energy
I want to simulate real physics of the problem
I think in real physic of the problem the salt concentration is too much low
Dose any one now how should I solvate the protein and its target in plasma: in not ionized water or in ionized water?
Does it true if solvate them in not ionized water?

Best regards
Farzad Kiani

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