RE: How to refer to side-chain via tcl-force scripting?

From: Tristan Croll (tristan.croll_at_qut.edu.au)
Date: Fri Jun 13 2014 - 02:08:51 CDT

• Next message: Norman Geist: "AW: How to refer to side-chain via tcl-force scripting?"
• Previous message: zeynab mohamad hoseyni: "How to refer to side-chain via tcl-force scripting?"
• In reply to: zeynab mohamad hoseyni: "How to refer to side-chain via tcl-force scripting?"
• Next in thread: Norman Geist: "AW: How to refer to side-chain via tcl-force scripting?"
• Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]

The atomselect keyword "sidechain" might help. Just a thought...

Tristan

From: owner-namd-l_at_ks.uiuc.edu [mailto:owner-namd-l_at_ks.uiuc.edu] On Behalf Of zeynab mohamad hoseyni
Sent: Friday, 13 June 2014 3:53 PM
To: namd-l_at_ks.uiuc.edu
Subject: namd-l: How to refer to side-chain via tcl-force scripting?

Dear all,

I need to impose force on the side-chain of some residues, using tcl-force scripting. Do you know if
the tcl-force interface provides any command so that you can refer to side-chain of the desired residue?

Thanks in advance for your help,
Zeynab

• Next message: Norman Geist: "AW: How to refer to side-chain via tcl-force scripting?"
• Previous message: zeynab mohamad hoseyni: "How to refer to side-chain via tcl-force scripting?"
• In reply to: zeynab mohamad hoseyni: "How to refer to side-chain via tcl-force scripting?"
• Next in thread: Norman Geist: "AW: How to refer to side-chain via tcl-force scripting?"
• Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]

This archive was generated by hypermail 2.1.6 : Wed Dec 31 2014 - 23:22:28 CST