Re: NAMD-Lite

From: Gianluca Interlandi (
Date: Tue Apr 15 2014 - 18:16:50 CDT

If you want to use NAMD in serial mode (i.e., with no parallelization),
then simply use the executable "namd2" without any charmrun in front. It
will run on a single CPU. Just read the "notes.txt" file that comes with
the source code. It describes how to use it.


On Tue, 15 Apr 2014, Hassan Kianinejad wrote:

> Dear NAMD users
> I have a question and I asked this many times, but no one replied.

> I want to use NAMD benchmarks to run on NAMD-lite which is the
> sequential version; however the configuration files are different and
> they do not support each other.

> I wondered if anyone could help me figure out a solution.
> Thanks,
> Hassan Kianinejad
> Graduate Student

Gianluca Interlandi, PhD
                     +1 (206) 685 4435

Research Scientist at the Department of Bioengineering
at the University of Washington, Seattle WA U.S.A.

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