AW: writedcd problem

From: Norman Geist (norman.geist_at_uni-greifswald.de)
Date: Tue Sep 03 2013 - 03:47:16 CDT

Check the writedcd command, somewhere you need to tell how many and which
frames to save or simply use the graphical interface "save coordinates" with
tcl commands logged to console to see how it works.

Norman Geist.

> -----Ursprüngliche Nachricht-----
> Von: owner-namd-l_at_ks.uiuc.edu [mailto:owner-namd-l_at_ks.uiuc.edu] Im
> Auftrag von jinxj
> Gesendet: Montag, 2. September 2013 16:32
> An: namd
> Betreff: namd-l: writedcd problem
>
> Dear professor,
>
> After dealing with a trajetory with pbctools using VMD, I tried to
> save the treated trajetory using the below command . But the saved dcd
> file is only 300K while my trajetory is 8000M. The VMD is emploied in
> LINUX.
>
> set all [atomselect top all]
> $all writedcd 123.dcd
>
>
> Xiaojie

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