From: Titis Sekar Humani (humani_at_batan.go.id)
Date: Fri Feb 22 2013 - 00:05:07 CST
Dear all,
I have some problem here. I got message on my terminal like I write bellow :
psfgen) Created by CHARMM version 31 1
psfgen) cross-term entries present in topology definitions
psfgen) aliasing residue HIS to HSE
psfgen) aliasing residue ILE atom CD1 to CD
psfgen) aliasing residue HOH to TIP3
psfgen) building segment U
psfgen) setting patch for first residue to NONE
psfgen) setting patch for last residue to NONE
psfgen) reading residues from pdb file chainH.pdb
psfgen) unknown residue type PEG
psfgen) extracted 279 residues from pdb file
psfgen) Info: generating structure...psfgen) unknown residue type PEG
failed!
ERROR: failed on end of segment
MOLECULE DESTROYED BY FATAL ERROR! Use resetpsf to start over.
MOLECULE MISSING! Use resetpsf to start over.
MOLECULE MISSING! Use resetpsf to start over.
MOLECULE MISSING! Use resetpsf to start over.
MOLECULE MISSING! Use resetpsf to start over.
MOLECULE MISSING! Use resetpsf to start over.
MOLECULE MISSING! Use resetpsf to start over.
vmd >
Anybody could help me to resolve my problem?
Thank you..
Best regard,
T.S. Humani
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