pre residues and ligands interaction

From: Ramin Ekhteiari (ramin_ekh_at_yahoo.com)
Date: Thu Nov 21 2013 - 06:48:15 CST

Hi,

Can someone advise me on how to calculate the energy between pre residues and ligand via VMD, for the trajectory file that has been generated at NAMD.

Would be grateful for any help.

Cheers,
Ramin.

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