hi every body,

From: rasti (rasti_at_ut.ac.ir)
Date: Wed Aug 21 2013 - 17:19:05 CDT

 

i used to apply Amber for running my simulations and i have recently
started using NAMD so iam really new to this.

the structure iam
working with, has got an unusual residue (methylated Val) and i think it
makes the top/par files not to work ... my be there is a patch missing??

how can i add one to substitute the NH of Val with methyl?

thanks,

Behnam
 

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