periodic boundaries

From: farzad kiani (farzad_kiani1364_at_yahoo.com)
Date: Sat Jul 07 2012 - 05:51:22 CDT

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Hi everybody  I've created a silicon box, using vmd software. How can I create psf file from box in vmd main> extensions> modeling> inorganic builder, so this psf file will run properly  in namd2 How should I set periodic boundaries that my silicon box extand Exactly. thanks

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