Simulation Using Both NAMD and VMD

From: Ajith Rathnaweera Rajapaksha Mudalige (
Date: Fri Apr 20 2012 - 17:05:28 CDT

Hi Everybody,

Is it possible to write a script for a NAMD simulation to access VMD at each time step through Interactive Molecular Dynamics mode (or any other possible way).

In my simulation I need to execute some VMD commands at each time step and define a new force according to the results output from VMD.

I highly appreciate if someone could shed some light in this direction.



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