segmentation errors

From: P Fajer (
Date: Sat Jun 16 2012 - 13:14:09 CDT


I am having problems with running AMD with GB on a multicore computer.
I can run 3-8 processors of AMD with explicit solvent; I can run number
of processors for MD with GB, but I can run only a single processor of
AMD/GB. Single processor execution is just fine, p2 results in
segmentation error. System is very small, 15 residues helix, memory
should not be the issue.


Professor and Director
Institute of Molecular Biophysics
Florida State University

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