Re: correlation functions

From: Aron Broom (broomsday_at_gmail.com)
Date: Sat Dec 10 2011 - 08:54:56 CST

I had a similar problem once. I didn't find anything in VMD for instance.
Grace, the GNU plotting program can do covariance and autocovariance, which
is essentially an non-normalized correlation.

On Sat, Dec 10, 2011 at 6:18 AM, Molecular Dynamics <
moleculardynamics_at_yahoo.com> wrote:

> Dear Namd users, ******
> ** **
> I have some NAMD output files for 10 ns with 5000 records. I want to
> calculate the correlation functions like -time, -velocity , auto and
> cross-correlation functions for analysis. Are there any tools or scripts
> for analysis of NAMD outputs to calculate the correlation functions ?****
> ** **
> Thanks for your help.****
>

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