From: Parisa Akhski (Parisa.Akhshi_at_chem.queensu.ca)
Date: Sun Aug 21 2011 - 09:05:16 CDT
Dear NAMD experts,
In ABF method, I am using "distanceXY" as a colvar to move an ion in XY plane and get the PMF profile. I am wondering what negative and positive signs of force mean in this case since the ion is moving on a circle (defined by the lower and upper boundaries).
Thanks,
Parisa
This archive was generated by hypermail 2.1.6 : Mon Dec 31 2012 - 23:20:44 CST