Re: gromacs analysis tools

From: Joshua Adelman (
Date: Sun Apr 03 2011 - 10:45:16 CDT

Two possible ways to do this are using catdcd:

or in VMD using the animate command:

Best of luck,

On Apr 3, 2011, at 5:54 AM, Molecular Dynamics wrote:

> Dear namd users,
> Iím a new NAMD user and want to use gromacs 4.5.4 analysis tools for my NAMD output files. I have some NAMD output files : output.coor , output.vel , output.dcd (binary coordinate trajectory output file). Can I convert these output files into gromacs output files and use gromacs 4.5.4 analysis tools ? If itís possible to do it, could you please explain this job ?
> Thanks in advanceM

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