.colvars.state file in ABF

From: Alex Liu (liu.alex77_at_yahoo.com)
Date: Mon Jan 03 2011 - 15:53:45 CST

• Next message: Giacomo Fiorin: "Re: Running bias exchange metadynamics simulations with NAMD"
• Previous message: Ajasja LjubetiÄ�: "Re: Running bias exchange metadynamics simulations with NAMD"
• Next in thread: Parisa Akhski: ".colvars.state file in ABF"
• Reply: Parisa Akhski: ".colvars.state file in ABF"
• Reply: Jérôme Hénin: "Re: .colvars.state file in ABF"
• Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]

I am using Deca-Alanine input files (ABF-tutorial files) to run ABF as a test.
The output file (<outputName>.colvars.state) as explained
in http://www.ks.uiuc.edu/Research/namd/2.7/ug/node48.html is not produced by
default. How can I continue the simulation in the next run? Can I use
(<restart>.colvars.state) instead?

Thanks,
Alex

• Next message: Giacomo Fiorin: "Re: Running bias exchange metadynamics simulations with NAMD"
• Previous message: Ajasja LjubetiÄ�: "Re: Running bias exchange metadynamics simulations with NAMD"
• Next in thread: Parisa Akhski: ".colvars.state file in ABF"
• Reply: Parisa Akhski: ".colvars.state file in ABF"
• Reply: Jérôme Hénin: "Re: .colvars.state file in ABF"
• Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]

This archive was generated by hypermail 2.1.6 : Mon Dec 31 2012 - 23:19:41 CST