From: Bjoern Olausson (namdlist_at_googlemail.com)
Date: Tue Jul 19 2011 - 05:43:34 CDT
On Tuesday 19 July 2011 11:32:06 Namd Namd wrote:
> Dear Namd experts,
> How can I write the Px Py Pz pressure tensor elements and
> forces acting on each atom to an output file ( like pdb or .coord and .vel
> ascıı format ) for analysis ?
If you are referring to the information contained in the NAMD output file, you
can use VMD "NAMD Plot" plug-in or write a tool on your own which grabs the
desired information from the NAMD output file like I did:
There are a lot of little helpfull tools out there, just use Google to find
> And Can acceleration information for each
> atom be written as an output ?
Please read the UG and search the mailinglist:
-- Bjoern Olausson Martin-Luther-Universität Halle-Wittenberg Fachbereich Biochemie/Biotechnologie Kurt-Mothes-Str. 3 06120 Halle/Saale Phone: +49-345-55-24942
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