Date: Fri Jul 01 2011 - 01:33:14 CDT
I want to switch my simulation from CHARMM to NAMD. The first problem is whether a RHDO crystal shape performs well in NAMD, since NAMD normally do a box or sphere?
Someone reported to do a rotation of the y-axis for the RHDO, so that it can work in NAMD. Has anyone tried this kind of tricks?
Any suggestion is greatly appreciated.
Thanks very much for you kind help
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