From: Gayatri Rathod (rathod12g_at_gmail.com)
Date: Tue Jun 28 2011 - 11:03:45 CDT
Using VMD, I merged a bombolitin4 molecule that I built using Molefacture
with 10 RDX molecules (built on Avogadro) using Merge Structures under
Extensions -> Modeling.
This ended with the completed system pdb and psf files. I used the required
conf file to equilibrate the system (after solvating and ionizing), but the
following error showed up:
UNABLE TO FIND BOND PARAMETERS FOR C H <ATOMS 1 6>
I checked the structures for the molecules in the system, I'm sure they are
correct before solvation - I don't know if they are correct after
Where is the error and how do I fix it?
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