From: 林星雨 (linxingyu1986_at_gmail.com)
Date: Thu Aug 19 2010 - 05:53:55 CDT
Dear all,
I have two questions about NAMD using CHARMM force field
The first one is Can NAMD2.7b1 (or later) use specific-ion LJ paramters for
Charmm force field ion?
And the second one is Can NAMD2.7b1(or later) correctly read the CHARMM
general force field parameter in a psf file? It seems that the command "$sel
get charge"
for VMD can not correctly get this information, which may be due to the atom
type for CHARMM general force field atoms are longer than the typical atom
type
-- Xingyu Lin Currently: National Institute of Biological Sciences, Beijing Dr. Niu Huang's Lab http://www.nibs.ac.cn/ Tel: 80726688-8572 Address: Beijing ZhongGuanCun Life Science Park, NO.7 Science Park East Road, NIBS B427 Postcode: 102206
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