Extract trajectory from replica exchange simulation

From: Shi, Chuanyin (cshi_at_ou.edu)
Date: Mon Jul 19 2010 - 09:19:21 CDT

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Hi, everyone,

I am running NAMD replica exchange simulation recently.
After the simulation, I wonder how to extract the trajectory for a certain temperature.
The recorded trajectories have various temperatures due to temperature exchange.
But I just need conformations under 298K.
I would appreciate if anyone can provide some help.
Thank you very much, have a good day.

Chuanyin Shi
Department of Chemistry and Biochemistry
Email: cshi_at_ou.edu

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