Re: Software to Mutate DNA

From: Alessandro Nascimento (as_nascimento_at_yahoo.com.br)
Date: Mon May 25 2009 - 10:19:25 CDT

I suggest NAB (http://casegroup.rutgers.edu) or even Coot
(http://www.ysbl.york.ac.uk/~emsley/coot/). The latter is developed
for visual inspection and macromolecular refinement using
crystallographic data, but does the job.

hope that helps

--alessandro

On Mon, May 25, 2009 at 10:39 AM, sunita gupta <sunita.bio_at_gmail.com> wrote:
> Hi all,
>
>
> In order to study the interaction of Protein-DNA compex, i need to mutate
> the DNA for eg. A->T and G->C. Can anyone tell me any software which does
> this? The mutate residue plugin in VMD,strictly says "it cant be
>
> used for DNA":(
> Thanking in Advance
>
> Best Regards
> Sunita Gupta
>
>
>

-- 
[ ]s
--alessandro

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