Re: display all frames simultaneously

From: gaillard_at_chimie.u-strasbg.fr
Date: Thu Apr 16 2009 - 22:20:37 CDT

Samuel Coulbourn Flores 花山 <scflores_at_stanford.edu> a écrit :
> Hi Guys,
>
> I wonder -- is it possible to display all frames of an ensemble,
> instead of "playing" them as a movie? I have each conformation
> separated with MODEL and ENDMDL tags in a PDB formatted file. I want
> to generate a picture of the conformational variability of my
> molecule. Please let me know how to do this if it is possible.
>
> Many thanks
>
> Sam
>
> Samuel Coulbourn Flores, PhD

It has nothing to do with NAMD, please choose the destination of your
messages more carefully.

Answer to your *visualization* question:

in VMD, load the trajectory, then
Graphics/Representations/Trajectory/Draw Multiple Frames/begin:end

Thomas Gaillard

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