Re: topology and parameter file for FAD

From: Demet Akten (demet.akten_at_gmail.com)
Date: Mon Mar 02 2009 - 02:47:01 CST

Thanks so much for sharing! this will really help a lot!
Demet

On Mar 2, 2009, at 9:01 AM, Monika Sharma wrote:

> hi.. find them attached.
> hope it helps!
> enjoi <330.gif>
> Monika
>
> On Sun, Mar 1, 2009 at 1:22 PM, Schreiner Eduard
> <eschrein_at_ks.uiuc.edu> wrote:
> I only know one paper, in which they seem to have used CHARMM
> parameters for FAD:
>
>
> J Biol Chem, Vol. 273, Issue 33, 21031-21039, August 14, 1998
> Interdomain binding of NADPH in p-Hydroxybenzoate Hydroxylase as
> Suggested by Kinetic, Crystallographic and Modeling Studies of
> Histidine 162 and Arginine 269 Variants
> Michel H. M. Eppink
>
>
> , Herman A. Schreuder§, and Willem J. H. van Berkel
> ¶
>
> link:
> http://www.jbc.org/cgi/content/full/273/33/21031
>
>
> eddi
>
>
> On Feb 28, 2009, at 8:40 AM, Demet Akten wrote:
>
> Dear all,
>
> I have a protein system with FAD cofactor. Has anyone already
> generated parameter and topology files for FAD molecule? Thanks in
> advance.
>
> Demet
>
>
>
>
>
>
> =====================================================
> Eduard Schreiner
> Theoretical and Computational Biophysics Group
> NIH Resource for Macromolecular Modeling and Bioinformatics
> Beckman Institute for Advanced Science and Technology
> University of Illinois, 405 N. Mathews Ave., Urbana, IL 61801
> Phone: 217-244-4361
> Fax: 217-244-6078
> http://www.ks.uiuc.edu/~eschrein/
> =============================================
>
>
>
> <par_all27_prot_lipid_fad.inp><fad_top.inp>

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