entropy calculation

From: hodak_at_chips.ncsu.edu
Date: Fri Dec 19 2008 - 15:18:28 CST

Dear NAMD users,

does namd has tools for calculating entropy using normal-mode analysis or
quasi-harmonic analysis? I need entropy estimate for my system.

Would something like amber's ptraj work (if there are no NAMD-native
tools)?

Thank you for your help and suggestions.

Miro

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