Re: How to use bigdcd on a trajectory while skipping first 1000 frames

From: Eric H. Lee (ericlee_at_ks.uiuc.edu)
Date: Thu Sep 25 2008 - 04:54:29 CDT

One solution would be to use catdcd to create a dcd file that starts
at frame 1001, and then use bigdcd along with your analysis script on
that file.

-Eric

On Sep 25, 2008, at 4:42 AM, maria goranovic wrote:

> Hello
>
> I am trying to use bigdcd for analysis of large trajectories.
> However, I want to start reading from frame number 1001 in my 5000-
> frame trajectory. How can I do this while using bigdcd?
> I think bigdcd reads each frame, does the analysis and purges it?
>
> Sincerely,
>
> -Maria
>
> --
> Maria G.
> Technical University of Denmark
> Copenhagen

Eric H. Lee
Medical Scholars Program
Theoretical and Computational Biophysics Group, UIUC
ericlee_at_ks.uiuc.edu

This archive was generated by hypermail 2.1.6 : Wed Feb 29 2012 - 15:49:52 CST