Re: Warning in log file

From: Axel Kohlmeyer (
Date: Wed Aug 06 2008 - 11:17:34 CDT

On Wed, 6 Aug 2008, tinni sona wrote:

TS> Hi,
TS> My system contains 34535 number of atoms and 10825 residues. The log
TS> file of my simulation is showing the following warning:
TS> Warning: Man, tiny Elvis, that number is huge!
TS> Warning: We don't know how X-Plor represents over Z999 residues
TS> Warning: And you just tried - so we'll fake it as -55000
TS> Warning: This is reversible, but only inside this program.
TS> Will it cause any problem in the simulation? I mean will the
TS> trajectory be affected for this warning?
TS> Please suggest.

it should not. but you should be able to avoid it
by splitting your system into segments where each
can start the residue counter fresh from 1.


TS> Thanks,
TS> Madhurima.

Axel Kohlmeyer
   Center for Molecular Modeling   --   University of Pennsylvania
Department of Chemistry, 231 S.34th Street, Philadelphia, PA 19104-6323
tel: 1-215-898-1582,  fax: 1-215-573-6233,  office-tel: 1-215-898-5425
If you make something idiot-proof, the universe creates a better idiot.

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