Re: charmm parameter and topology files

From: Jerome Henin (jhenin_at_cmm.chem.upenn.edu)
Date: Tue May 27 2008 - 11:20:30 CDT

Dear <insert name here>,

For trimethylated lysine, I suspect you can construct a topology by
combining lysine with a piece of the choline headgroup from the lipid
forcefield. You may have to just copy over a few dihedral
parameters...

I can't help you with the other ones, though.

Best,
Jerome "Gooseberry"

On Tue, May 27, 2008 at 11:17 AM, <me00109_at_cc.uoi.gr> wrote:
>
>
> Dear friends,
> I need parameter and topology files for trimethylated lysine, phosphorylated
> threonine and serine and dimethylated arginine. Does anybody know if they are
> availabe or should I make them on my own?
>
>
> Thank you
>
>

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