Re: problem with namddat_unix: Plz help...

From: JC Gumbart (gumbart_at_ks.uiuc.edu)
Date: Fri Mar 16 2007 - 13:49:48 CDT

You want namdplot, not namddat, I think.

On Mar 16, 2007, at 12:10 PM, <hl332_at_drexel.edu> <hl332_at_drexel.edu>
wrote:

> Hi all,
> I am not sure there is a problem with namddat_unix script
> (Downloaded from namdtututorialfiles) or I am making some mistakes
> in running it. Here is the thing:
>
> I tried running this script in my terminal by:
>
> ./namddat_unix TEMP mainrun.log
>
> I GET following message in terminal:
> ETITLE: TS BOND ANGLE DIHED IMPRP ELECT VDW BOUNDARY MISC KINETIC
> TOTAL TEMP TOTAL2 TOTAL3 TEMPAVG
> Calculating average of TEMP
>
> Finally i get a file called data.dat
> Opening it with emacs/xemacs shows nothing except a single line:
> TS TEMP. I tried plotting with xmgrace, i see nothing (obviously
> when there is no data in it).
>
> I dont know where did i go wrong. Any help will do great.
>
>
> Regards
> Harish
>
>
>
> -------------------------------------------------
> Harish Vashisth (Ph.D Candidate)
> CAT-361,Chemical & Biological Engg.
> Drexel University, Philadelphia, PA
> office: 215-895-5823

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