From: Xu, Jiancong (xuj1_at_ornl.gov)
Date: Fri Dec 07 2007 - 13:34:46 CST
This might be a silly question, but I looked all over the manual and tutorial, still couldn't find the answer. In the PSF file generated by VMD, the number of nonbonded interactions is almost always zero except in alchemical transformation. And I'm wondering why it's that and where the VDW interactions come from in NAMD.
Jiancong Xu, Ph.D.
Center for Molecular Biophysics
Building 5700 MS6164
Oak Ridge National Laboratory
Oak Ridge TN 37830, USA.
Tel: (865) 241-1537
This archive was generated by hypermail 2.1.6 : Wed Feb 29 2012 - 15:45:40 CST