general question on protein-membrane simulations

From: L. Michel Espinoza-Fonseca (mef_at_ddt.biochem.umn.edu)
Date: Wed Apr 18 2007 - 11:26:46 CDT

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Hi guys,

Here I am again. I'd like to share with you my previous experiences
and I'd like to get some feedback from you. Since few months ago, I
started working on MD simulations of protein-membrane systems. It has
been a challenging task so far, and I still wonder how to solve an
issue: avoid the failure of the RATTLE algorithm.

I've been building my bilayers using the MEMBRANE

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