From: xing jing (nkjingxing_at_gmail.com)
Date: Tue Mar 06 2007 - 22:43:15 CST
Dear John Stone,
Thank you very much.
The version of VMD I use is 1.8.5, if there is more recent one?
2007/3/7, John Stone <johns_at_ks.uiuc.edu>:
> You need to be sure that you correctly transfer the DCD files in
> binary mode, otherwise they will be corrupted by the transfer process.
> Some windows file transfer programs assume that any unrecognized file
> extension is a text file, and will damage the contents of the DCD file,
> so you'll need to make absolutely sure that this is not occuring during
> your transfer. If the DCD file is larger than 2GB, you may also need to
> make sure that you're running one fo the most recent versions of VMD since
> older versions of the Windows version of the DCD plugin were not able
> to read very large files due to limitations in the Windows C library
> stdio implementation.
> John Stone
> On Tue, Mar 06, 2007 at 01:25:40PM -0800, lily jin wrote:
> > Hi,
> > I trnasfered the dcd files generated by NAMD from the cluster to my
> local machine. However, they cannot be open under my windows system with
> VMD. Can anyone give me a solution to convert them on my machine? Thank you!
> > Lily
> > We won't tell. Get more on shows you hate to love
> > (and love to hate): Yahoo! TV's Guilty Pleasures list.
> > http://tv.yahoo.com/collections/265
> NIH Resource for Macromolecular Modeling and Bioinformatics
> Beckman Institute for Advanced Science and Technology
> University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
> Email: johns_at_ks.uiuc.edu Phone: 217-244-3349
> WWW: http://www.ks.uiuc.edu/~johns/ Fax: 217-244-6078
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