aligning ligands

From: Narender Singh Maan (
Date: Fri Feb 23 2007 - 12:39:45 CST

HI all, does anybody know of any program/software which can align small
chemical compounds/ligands (based on tanimoto coff. or something similar).
This is specially a headache if the cocrystallized proteins are not similar

Any suggestions would be of great help

Thank you

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