Re: Building PDB files for DNA.

From: Andrew D. Fant (fant_at_pobox.com)
Date: Fri Dec 15 2006 - 12:08:23 CST

Wang, Boyang wrote:
> Dear all,
>
> I have a simple question about building PDB files for DNA.
>
> Is it possible to make a PDB file of a DNA molecule with 100 or more
> bases? The DNA.tar.gz file from NCSA contains the PDB of a short DNA
> molecule.
>
> I looked up on-line, and there is a DNA-builder in the Ecce Builder of
> Pacific Northwest National lab. I did not find any other software that can
> do this.

I believe that Namot ( http://namot.lanl.gov or http://namot.sourceforge.net )
can be used for this

-- 
Andrew Fant    | And when the night is cloudy    | This space to let
Molecular Geek | There is still a light          |----------------------
fant_at_pobox.com | That shines on me               | Disclaimer:  I don't
Boston, MA     | Shine until tomorrow, Let it be | even speak for myself

This archive was generated by hypermail 2.1.6 : Wed Feb 29 2012 - 15:44:16 CST