Re: charge on protein

From: Leonardo Trabuco (ltrabuco_at_ks.uiuc.edu)
Date: Wed Oct 18 2006 - 22:17:56 CDT

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On Wed, Oct 18, 2006 at 09:57:28PM -0500, Dhiraj Srivastava wrote:
> Hi all
> is there any way to find charge on my protein after generating
> structure file through psfgen? i want to know charge on my protein so i can
> add extra ions to neutralize it.

This small VMD script does this:
http://www.ks.uiuc.edu/Research/vmd/script_library/scripts/total_charge/

Best,
Leo

-- 
Leonardo Trabuco, Ph.D. student
Theoretical and Computational Biophysics Group
University of Illinois at Urbana-Champaign

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