SMD Energy

From: Pijush Ghosh (
Date: Tue May 30 2006 - 10:47:32 CDT

Dear SMD Experts

 In NAMD and from concept of statistical mechanics is it logical to conclude
that the area under the Force-Displacement curve for a protein is equal to
the difference in the initial (t=0) and final (t=T) total energy(bonded +
nonbonded) ?


  I would appreciate any discussion on this.


Pijush Ghosh

PhD Student

Department of Civil Engineering

North Dakota State University

Fargo. ND. 58105. USA





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