Date: Fri May 26 2006 - 12:15:55 CDT
I was wondering if someone could tell " IS PERIODIC VELOCITY PULLING POSSIBLE IN SMD USINg NAMD".I want to pull my protein using x(t)=x'+sin(wt) rather than simply x(t) =x'+vt.
My second question is whether we can use "NOSE'-HOOVER THERMOSTAT" instead of LANGEVIN. Namd user guide talks something about using Nose'-Hoover pressure control for simualtions but is thermostat possible.
Any answer would be of great help
CAT-361,Department of Chemical & Biological Engg.
Drexel University, Philadelphia, PA
This archive was generated by hypermail 2.1.6 : Wed Feb 29 2012 - 15:42:05 CST