energy minimization

From: xiaojing gong (gongxiaojing1981_at_yahoo.com.cn)
Date: Sun Sep 25 2005 - 22:05:32 CDT

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Dear all,
       When I want to do the energy minimization, I read the NAMD Users Guide, it provides two kinds of parameters to control the minimization, but I have seen an example for minimization before, it does not contain any parameters mentioned above, the protein is only fixed and RigidBond is used. I am confused.
Could any one give me some suggestions ?
gongxiaojing

                
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