From: Swarna Patra (swarna_at_physics.usyd.edu.au)
Date: Thu May 01 2008 - 20:04:47 CDT
could you pl give me the link for 'cionize'. I got meadionize is it the same?
I have some problem in compiling. I am on suse linux machine and using gcc
On Friday 02 May 2008 02:32, Leonardo Trabuco wrote:
> Hi Swarna,
> You should use the 'cionize' program instead, which implements the same
> algorithm but is *much* more efficient. It also supports multithreading
> and GPU acceleration. It is distributed as a VMD plugin in the latest
> test versions.
> On Thu, May 01, 2008 at 02:32:45PM +1000, Swarna Patra wrote:
> > Hi
> > I am trying to compile sodium.c program available in namd site under
> > MDtools and then under sodium. I am getting compilation error as follows
> > tmp/ccdoTSKp.o: In function `main':
> > sodium-1.c:(.text+0x257): warning: the `gets' function is dangerous and
> > should not be used.
> > sodium-1.c:(.text+0x843): undefined reference to `nint'
> > sodium-1.c:(.text+0x85f): undefined reference to `nint'
> > sodium-1.c:(.text+0x87b): undefined reference to `nint'
> > sodium-1.c:(.text+0x959): undefined reference to `sqrt'
> > collect2: ld returned 1 exit status
> > I tried to send e-mail to the address given, it doesn't work. If anyone
> > has used it please let me know.
> > thanks
> > swarna
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