Re: Question about 'NAMD TUTORIAL'

From: Ben Chern (futuredream.1_at_gmail.com)
Date: Thu Mar 13 2008 - 00:18:21 CDT

Thank you very much!

On Thu, Mar 13, 2008 at 7:46 AM, Peter Freddolino <petefred_at_ks.uiuc.edu>
wrote:

> Hi Ben,
> you can do this with the pairinteractions feature in namd
> (http://www.ks.uiuc.edu/Research/namd/2.6/ug/node38.html). NAMDEnergy
> offers a gui for this in VMD, but it is best to first understand what is
> going on in the raw NAMD interface.
> Best,
> Peter
>
> Ben Chern wrote:
> > Hello,
> > as the Section 2.1.3 Energies describes , we can get all the enerygies
> > of the ubiquitin-water system.
> > Can we get the enerygies (bond, non-bond, etc.) between two atoms in
> > the system?
> >
> > Thank you in advance.
> >
> > --
> > Ben
>

-- 
Ben

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