DNA hydrogen bonds

From: Maxim Karachevtsev (karachevtsev_ne_at_mail.ru)
Date: Fri Feb 02 2007 - 02:00:46 CST

Hi all!

Could sombedy let me know if in NAMD (topology file) is a patch which can help to model two different strands of DNA (hydrogen bonds between nucleic bases of different DNA strands).

If there is not such patch how to write it by myself (main principles)

Thank you
Maxim

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