Autopsf

From: a-yermakova_at_northwestern.edu
Date: Fri Jul 21 2006 - 16:00:41 CDT

('binary' encoding is not supported, stored as-is) Hello all,
I'm using the Automatic PSF Builder on a glycoprotein (hemagglutinin). It keeps halting and telling
me that there are unparametrized components that I cannot seem to parametrize. I also cannot delete
them for they may be important for the simulation.
I'm using the following topology files:
top_all22_prot.inp
top_all22_sugar.inp
top_all27_prot_lipid.inp
Does anyone know of any other topology files I can use that would be useful for parametrizing this
protein?
Thank you!
Anya

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