atom distances

From: bo baker (bo.bybaker_at_gmail.com)
Date: Wed Jan 04 2006 - 14:17:29 CST

Hello, NAMD:

I would like to exam the distances between two charged atoms from a MD
run. How could I do this? I have search the mail list, and not easy to
find the answer. The VMD can do it by pick up the two targeted atoms.
But how can I get the all the distance value from the trajectories?

Thank you for your advice.

Bo

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