distance restraints during a dynamic

From: Nicolas Sapay (n.sapay_at_ibcp.fr)
Date: Mon Apr 11 2005 - 11:13:40 CDT

Hello all NAMD users,
I want to applied a constant force on a peptide during a dynamics. I
have prepare a "force.pdb" file and switch on the constantforce
parameter. However, I don't want to destroy the peptide conformation.
So, I want apply some atom distance restraints along the backbone (for
example distance between CO and NH). Is that possible with NAMD? I don't
have found the info into the doc!
Thanks for your help!

Nicolas

_ Nicolas Sapay ________________________ PhD student _

IBCP - Institut de Biologie et Chimie des Protéines
Pôle BioInformatique Lyonnais - Gerland
>> 7, Passage du Vercors
69367 Lyon cedex 07, France
>> Tel : (33) (0)4 72 72 26 46
>> Fax : (33) (0)4 72 72 26 04

____________________________________ n.sapay_at_ibcp.fr _

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