any script to build membrane+protein+solvent?

From: Baoqiang Cao (caobg_at_email.uc.edu)
Date: Fri Apr 08 2005 - 10:02:36 CDT

Dear All,

I'd like to build a system consists of membrane, membrane protein, and solvent. Following some tutorials, I have got a membrane by run "membrane -l popc -x 60 -y 60" on VMD, it is away from the protein. It is really hard to graphically position the protein in the membrane, especially considering an old monitor and a very obsolete CPU. A script beening able to build the whole system and then psf and pdb files for MD is highly appreciated, any helps please? Thanks.

Best,
 Baoqiang Cao

This archive was generated by hypermail 2.1.6 : Wed Feb 29 2012 - 05:18:41 CST