difference between run and minimize

From: snoze pa (snoze.pa_at_gmail.com)
Date: Fri Sep 09 2011 - 16:01:55 CDT

Dear NAMD users,

What is the difference between minimize =1000 and run=1000

Most of the NAMD tutorials uses both minimize and run to minimize a
protien.

Thats strang?

thanks in advance
S

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